Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858696.1_cds_XP_016514034.1_26525
CDS Infomation

[gene=LOC107830876] [db_xref=GeneID:107830876] [protein=protein STICHEL-like 2] [protein_id=XP_016514034.1] [location=join(35477..37072,37170..37359,38450..38632,38736..38957,39905..40622,41278..41332,41669..41740)] [gbkey=CDS]
Sequence

ATGGATGGGCGACGGCATTCAGTTGATGTTCCTATATCGAGAACGCTGGTTGCACTTAGG
AGAGTGAAGTCACTTAGGGATCCAACCACTAATTCAATAAGCAAGTTCTCCGCAATGGTT
GATAAGTTGAATTGGGAAACAAATTCAAGTAATGCTATTACTTTGGGGTTTGAAGATAGG
CAGGAAGTAAGGTATAATGATGATAGCAGCGCAATGCGGCCAAATGGCTCCATTTTGTTT
GCCAACCGGGATGAATATGTAGGTGGTCAGGAAGTAGGGATGAATATGGGGAATTGCAAA
TCGCAGTTGGTTTCCCCTCAAATGGATCATTGGAACGATAATGTTGAATTGTGTAATGTA
CGACAACCAACTGACATAGAAAGAGGAAATAAATCTTCAACTAAAAGATTAGGTCACTCT
TATGGGGATAAAGGAATGGCAATGACTTCCAACGCTTGGGAGGAGGGCATTGGTTCAAGT
AAAGAATCAAATGACGGAGCAGTGCAGGCCAAAGATGTAGTTTATTATGGAACAAAGAAG
AAATGCAAACATAGAAAACATACTAGATCTTCTAGAACAGCAGCTGGTGATGTTTTGAGT
CGTGTAGGTAGTCCCTACTTTTCTGTAAGTGATGCTCCAAACGGAAGCTCAAACCATGCC
ATTTCACTGTACGGAAATGAAGATGTTTACGATGTGGAATCTGATCGTGGTGGATGTGGA
ATTAGCTCCTGCTGGTTAGGCACCCCTAGGTTTAGAGAATCAAACCTGAGCACACATATG
GAAGAGCGACCACTTCTGTCTTCAGGAATTGATGAGACACTCTTAGCTGTACAAAGAAGA
AGCTGGATGCATGATAACAATGGAGTTGCTTCACATTCAGAAAGTCCTAGAAGTATCAGT
CAAAAGTTCAGGCCAAAATCATTCAGTGAAATGGTGGGACAGAATGTAGTAACAAGGTCT
CTGTTGAACGCTATCTCAAGTGAGCGGATAAATCCATTCTACCTGTTTCATGGTCCTCGT
GGTACAGGTAAAACATGCGCATCAAGAATTTTTGCTGCCGCATTGAACTGTCTTTCTCCT
GATGCTGAGAGACCATGTGGCCTCTGCAGAGATTGTGTTCTGTACTTCTCAGGAAGAAGC
AAGGATGTTAAAGAAGTGGATTCCTTGAAAATCAATAGAATGGAGAGAATTAGATTACTT
CTCAAGAATGCTGTGGCGCCTCCAGTTTCTTCCAAATTTAAGGTTTTTATTATAGATGAG
TGCCACTTATTGCGAGAGGAAACATGGACAAGTATTTTAAATCACCTGGAAGAACTATCT
CGGCATGTGATCTTCATAATGATCACCCCTGACCTTGAGAAGCTGCCTCGTACTGCAGTA
TCACGGTCCCAGAAGTACCATTTTTCCAAGATAAAAGAAGTCGATATTTCGAACAGGTTA
CGCGAAATTTGTGAGGATGAAAGAATCACTTTTGATCAGGATGCTTTAGATTTCATTGCT
TGTAAATCAAATGGTTCACTTCGAGATGGGGAGATAATGCTCGAGCAGCTAAGTTTGCTT
GGGAAAAGAATAACAACACCATTGGTGTATGAGCTAATTGGAGCTGTCTCTGATGATGAG
TTGCTGGAGTTGCTGCATCTGGCATTGTCATCCGACACTTCAAATACAGTTAAAAGAGCC
AGAGAGCTAATGAGATCAAGGATAGATCCCATGCAACTAATATCGCAGCTAGCAAATCTA
ATAATGGACATTCTTTCTGGAAAATGTCAAATAAGTGCTTGTGAAGCTGAAGCTGAGAAA
CAGCAACTTAGTCATGCACTCAAAGTACTCTCTGAGATGGAAAAACAATTGAGGATGTCA
AAAAATCAAACAACATGGCTGACTGCTGCACTTCTGCAGTTAAGCTCAGTGGGAGCTTTA
GTCGACGCCAAAGATGGAAATTCGTGCATGAGAACGGTATACCAACAAGATCCTGATGGT
AATCCGTGTAGTACATCATCAACAAGTGAGAGTTTGAAGCACCTTTCAACTTGCGCATGT
GAAAGCATTGAATCTTGCAAAAGGGGAATGCAGGATGATAAAGAAACTCTGTCATCTGTA
TGGAATAAAGCTATTGAAATGTGCGAATCCAATTCACTTGCAAACTTTTTGAGAAGACAA
GGGAAGTTGTCATCAATTCGTCTTAAACAAGGTTTGGCAGTTGCTGAACTGGAGTTCTAT
TGCCCCAAAGACATATCAAAGGCTGAGAAATCATGGAAACCCATTGCAAATGCGCTTCAG
CGAACACTATGCTGCAATGTGGAAATCAGAATCAATCTTGTTCCTGGCTGTTTCCTCAAA
AAGTATTCCAGAATTAAAAGGTTGACTTTTAGACTTTTTAACTGTTCACGTGGCAAGCCT
TATAAGTCGCTTTCCAAGATGGAATGTAGAAGTGATCCATCGGAGAACTCCGATTCTGCT
TCTAAAAGAGTCATAATGGTGGATAAAGTTGTTGAAACATGTTCCTCTGAGTGTTTATCT
CAAAACACTCAAATATGTTGTCACGGCAGAGAAATTATGACCATAAGAACCAGTGATGGA
AATGCACTAAGCATTGGATCAGATACACCTCAGATATTATTGACGGATGGTTCCCTGCTA
ACAAATCAGTTGGAATCTGATTGTTTGAAAGAGGGAAGTACTTGCAGATGCCGGGATTCG
TTTACCATAGAGTCGGAGAAAAAACCAAGCTGTTTTCCTAGAACAGTAGGACTTCTAAGG
AGATCAAGTTCATCGAATGCCTCTCATATGACTTTTTCGATTACCCAACCACAAAGCAAT
TTGGTCTTATCCATTCCCAGCAAAACACCTTGTCAAAACCACATTCCTTACAGCAGTTCA
AATAATCACTCTTCTGGGAATACAGACTTTTCCAAGGAGTCAAGGTCGCGTTGTTGGAGA
TCAGCTCTGTTACCCTTCAGGAAGGCTTGGCAGCTGAAACATCAGCATGAAAATCCACAC
CAAGAGTGGATTCTACCTTATTCTGCTGCAAATTAG

Peptide Sequence

PEP ID

XP_016514034.1
PEP Infomation

PREDICTED: protein STICHEL-like 2 [Nicotiana tabacum]
Sequence

MDGRRHSVDVPISRTLVALRRVKSLRDPTTNSISKFSAMVDKLNWETNSSNAITLGFEDR
QEVRYNDDSSAMRPNGSILFANRDEYVGGQEVGMNMGNCKSQLVSPQMDHWNDNVELCNV
RQPTDIERGNKSSTKRLGHSYGDKGMAMTSNAWEEGIGSSKESNDGAVQAKDVVYYGTKK
KCKHRKHTRSSRTAAGDVLSRVGSPYFSVSDAPNGSSNHAISLYGNEDVYDVESDRGGCG
ISSCWLGTPRFRESNLSTHMEERPLLSSGIDETLLAVQRRSWMHDNNGVASHSESPRSIS
QKFRPKSFSEMVGQNVVTRSLLNAISSERINPFYLFHGPRGTGKTCASRIFAAALNCLSP
DAERPCGLCRDCVLYFSGRSKDVKEVDSLKINRMERIRLLLKNAVAPPVSSKFKVFIIDE
CHLLREETWTSILNHLEELSRHVIFIMITPDLEKLPRTAVSRSQKYHFSKIKEVDISNRL
REICEDERITFDQDALDFIACKSNGSLRDGEIMLEQLSLLGKRITTPLVYELIGAVSDDE
LLELLHLALSSDTSNTVKRARELMRSRIDPMQLISQLANLIMDILSGKCQISACEAEAEK
QQLSHALKVLSEMEKQLRMSKNQTTWLTAALLQLSSVGALVDAKDGNSCMRTVYQQDPDG
NPCSTSSTSESLKHLSTCACESIESCKRGMQDDKETLSSVWNKAIEMCESNSLANFLRRQ
GKLSSIRLKQGLAVAELEFYCPKDISKAEKSWKPIANALQRTLCCNVEIRINLVPGCFLK
KYSRIKRLTFRLFNCSRGKPYKSLSKMECRSDPSENSDSASKRVIMVDKVVETCSSECLS
QNTQICCHGREIMTIRTSDGNALSIGSDTPQILLTDGSLLTNQLESDCLKEGSTCRCRDS
FTIESEKKPSCFPRTVGLLRRSSSSNASHMTFSITQPQSNLVLSIPSKTPCQNHIPYSSS
NNHSSGNTDFSKESRSRCWRSALLPFRKAWQLKHQHENPHQEWILPYSAAN

Transcript Sequence

Gene sequence data has not been registered.